Composite
Part:BBa_K3286204
Designed by: Ben Kuipers Group: iGEM19_Wageningen_UR (2019-10-20)
Two component system RpfCch + RpfG
The function of this composite part is that's a Two component system able to sense a diffused signalling factor (DSF)[1]. The sensor is called RpfC(ch) (BBa_K3286200).When DSF is present, the RpfCch will autophosphorylate and transfer the phosphate group to the enzyme RpfG. RpfG (BBa_K3286201) is a phosphodiesterase which is able to cleave c-di-GMP. This results in activation of this enzyme, which will decrease the amount of c-di-GMP in the cell.
- H. Slater, A. Alvarez-Morales, C. E. Barber, M. J. Daniels, and J. Maxwell Dow, “A two-component system involving an HD-GYP domain protein links cell-cell signalling to pathogenicity gene expression in Xanthomonas campestris,” Mol. Microbiol., vol. 38, no. 5, pp. 986–1003, 2000.
Sequence and Features
Assembly Compatibility:
- 10INCOMPATIBLE WITH RFC[10]Illegal EcoRI site found at 1922
Illegal PstI site found at 887
Illegal PstI site found at 1493
Illegal PstI site found at 2120 - 12INCOMPATIBLE WITH RFC[12]Illegal EcoRI site found at 1922
Illegal NheI site found at 7
Illegal NheI site found at 30
Illegal PstI site found at 887
Illegal PstI site found at 1493
Illegal PstI site found at 2120 - 21INCOMPATIBLE WITH RFC[21]Illegal EcoRI site found at 1922
Illegal BglII site found at 288
Illegal BglII site found at 3362 - 23INCOMPATIBLE WITH RFC[23]Illegal EcoRI site found at 1922
Illegal PstI site found at 887
Illegal PstI site found at 1493
Illegal PstI site found at 2120 - 25INCOMPATIBLE WITH RFC[25]Illegal EcoRI site found at 1922
Illegal PstI site found at 887
Illegal PstI site found at 1493
Illegal PstI site found at 2120
Illegal NgoMIV site found at 818
Illegal NgoMIV site found at 909
Illegal NgoMIV site found at 1736
Illegal NgoMIV site found at 1831
Illegal NgoMIV site found at 2890 - 1000COMPATIBLE WITH RFC[1000]
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Categories
Parameters
None |